These Gluten-Free Banana Blueberry Muffins are moist, sweetened only with bananas, and are the perfect wholesome breakfast muffin. Made with coconut flour, the muffins have a tender, soft crumb that’s remarkably similar to traditional wheat muffins with a slight banana flavor. And they’re bursting with blueberries! These muffins freeze super well too — so they’re great for meal prep!

Let’s talk muffins! I’m a major muffin lover, and since I started making gluten-free recipes, I have made a lot of delicious gluten-free muffins! They make for such a good, easy breakfast that’s easy to keep on hand in the freezer for when you need a quick breakfast or something to take with you to snack on throughout the day. I’m also a major lover of recipes with blueberries, so this ticks off so many of my boxes.
Some of my other favorite muffins, like these gluten-free banana nut muffins and these incredible gluten-free lemon poppyseed muffins, are stacked in my freezer with these on the regular. We just can’t get enough of them!! I’ve also got quite a few of my favorite muffin recipes in my cookbook!
For more gluten-free muffins recipes, see my gluten-free muffin recipe roundup!

These gluten-free banana blueberries are bound to be a hit, because they are all the things: delicious, healthy, easy to make, and easy to store! If you’re like me, there are probably a lot of weeks where you hopefully buy a bunch of bananas to eat as a snack, and then they end up a little too spotty for your liking. Well – those bananas are the perfect thing to turn into these GF banana blueberry muffins! The ripeness contributes a ton of sweetness to these easy GF muffins.
These healthy little muffins are bound to be a hit because this recipe is adapted from one of the most popular recipes on Bakerita – Paleo Chocolate Chunk Banana Bread. It’s sooo good and totally tastes like regular banana bread, hence why everyone loves it. Since this muffin recipe is similar to that banana bread, I knew they would be a hit too!

These coconut flour muffins have a tender, soft crumb that’s remarkably similar to traditional wheat muffins with a slight banana flavor and bursting with fresh blueberries. I adore how fruity these muffins are, and they taste amazing with a little bit of almond butter spread on top. They’re made in one bowl and 10 minutes. What more could you ask for?!
Tips for the best gluten-free banana blueberry muffins
- Use ripe bananas. Since they act as our sugar in this recipe, it’s important to use ripe bananas that have concentrated sugars!
- Don’t replace the coconut flour. These are coconut flour muffins, and coconut flour is a very uniquely absorbent ingredient. Other flours require about 3x as much to get the same absorbency. I wouldn’t recommend substituting another flour.
- Use fresh blueberries! Frozen can also work, but if using frozen, be sure to drain and thaw completely before using so the batter doesn’t get too moist.
- Let your eggs come to room temperature to ensure everything incorporates smoothly.
- Use a metal muffin pan instead of silicone, which leaves the muffins a little too wet and doesn’t allow them to bake through as well.
- Use a cookie scoop to ensure your muffins are evenly sized, which will help them bake evenly! I like this large cookie scoop for muffins.

Do muffins have a lot of sugar?
They absolutely do not! In fact, these blueberry muffins have absolutely no added sugar aside from the banana. They’re Paleo-friendly, grain-free, gluten-free, and refined sugar-free. I loved snacking on these muffins pre-and post-workout. They also make a quick grab-and-go breakfast when you’re in a rush. Mmmm…so good. Now I’m craving muffins.
Do muffins freeze well?
Yes, they do! These blueberry banana muffins freeze perfectly in an airtight container for up to six months. You can just reheat one in the microwave for a super quick and delicious breakfast treat or let them thaw out in the fridge overnight.

Want more gluten-free muffins?
- Gluten-Free Vegan Double Chocolate Muffins
- Paleo Morning Glory Muffins
- Paleo Banana Nut Muffins
- Gluten-Free Vegan Lemon Poppyseed Muffins

Wholesome Banana Blueberry Muffins (Gluten-Free)
Ingredients
- 4 bananas, 2½ cups mashed or 575 grams
- 4 eggs, room temperature
- ½ cup 140 grams almond butter, or nut butter of choice
- 3 tablespoons coconut oil, melted
- ½ cup 75 grams coconut flour, see Notes
- ½ teaspoon cinnamon
- 1 teaspoon baking soda
- 1 teaspoon baking powder
- 1 teaspoon vanilla extract
- ¼ teaspoon kosher salt
- 1 cup blueberries, fresh is best but frozen will work too
Instructions
- Line a muffin tin with muffin liners and preheat the oven to 350ºF.
- In a large bowl or mixer, combine the mashed bananas, eggs, coconut oil, vanilla extract and nut butter until fully combined.
- Add the coconut flour, cinnamon, baking soda, baking powder, and sea salt to the wet ingredients and mix well. Fold in the blueberries.
- Pour the batter into the prepared pan and spread it evenly.
- Bake in the preheated oven for about 11-13 minutes for mini muffins or 22-25 minutes for regular sized muffins, or until a toothpick inserted into the center comes out clean.
- Remove from oven and allow in the pan for 10 minutes, and then remove from pan and let cool completely on a cooling rack.
Notes
- Recipe adapted from my Paleo Chocolate Chunk Banana Bread
- If you’re using frozen blueberries or if your batter seems a little too thin, you can add up to another tablespoon of coconut flour to help absorb extra moisture.

Way too oily and soggy. Followed recipe exactly with fresh blueberries. I cooked them for about 30 minutes but they are still mushy. Suggest at least 3/4 cup flour or reducing the almond butter or oil. Had to throw them out.
Hi Alan – I’m so sorry you had trouble, I know how frustrating it is when recipes don’t come out! Not sure what went wrong, because I’ve made these many times without problems. You could try using one less banana next time, or adding a few extra tablespoons of coconut flour to firm them up a bit.
Turned out well for me. Followed the recipe exactly, and used forzen organic blueberries. One thing, there was enough batter for 36 mini muffins i.e. baked these in two batches.
So glad you enjoyed them Jenn! Thanks for your feedback.
Hello! I just read that baking powder is not paleo complaint after I made these. Is this true :(
Hi Jen, some baking powders contain cornstarch, which is not paleo compliant. It depends on the brand! You can make your own baking powder by combining 1 part baking soda with 2 parts cream of tartar as a replacement if your brand isn’t compliant.
I stumbled upon this blog for the first time & was not disappointed! I made these today & they were absolutely delicious! It made my kitchen smell amazing! I saw a comment earlier about the calorie content and with my calculation this recipe made 12 large muffins, with estimated calories of 181 each. Hope that helps others! These are great for a breakfast on the go, and certainly a healthier muffin alternative. Thanks so much! Can’t wait to try other recipes. Happy New Year!
Thanks so much for sharing your feedback and the calorie info! Hope you find many other recipes you love :) Happy New Year to you too!
These were yummy but came out pretty mushy. I had to use almond flour as I was out of coconut – is that why? Maybe I needed more flour? Thx.
Hi Kim, yes, that is exactly the problem. Coconut flour is 3x more absorbent than almond flour, so you would’ve needed to add 3x the amount of almond flour to get similar results. It’s always best to use coconut flour when it’s called for, as subbing for it usually doesn’t work well since it’s a unique flour.
How many full sized muffins does this make?
As mentioned in the servings section above, it makes 18 muffins. Enjoy!
A guilt free yummy dessert! I have made these for my baby who is 10 months old. I hope he likes them as much as I do. But even if he doesn’t, no worries, because I can eat them all!!
I halved the whole recipe since I didn’t have sufficient bananas.
So thrilled to hear you’re loving the muffins Kauser, hope your little one does as well!
We love these muffin!!! Best ever!!! Do you have nutritional information for them?
So thrilled to hear that!! I’ll add nutritional info to the recipe right now :)
How do you store these? They are delicious but I wasn’t sure if they should go in the fridge or on the counter covered? Can’t wait to make again!!
Hi Ashley, they’ll last on the counter for 2-3 days probably, and about a week in the fridge. Even longer in the freezer! Hope this helps.
Just made these today. Wow, great recopie. Moist and tasty and just a hint of sweetness from the bananas, perfect for me.
I added lemon zest and the juice of 1/2 lemon mixed in with the mashed bananas.
Thank you.
Love the lemon addition! Thanks so much for sharing your feedback and I’m so thrilled you’re enjoying them, Johanne.