Meet your new fall favorite: these Gluten-Free Vegan Apple Cinnamon Scones are tender, flavorful, and simply irresistible. Made with caramelised apples and toasted pecans, the dough for these simple scones comes together easily. Thanks to Bob’s Red Mill for sponsoring this post!

I am a scone girl, for sure. I first fell in love with gluten-free vegan scones when I started testing recipes for my baking cookbook, Bakerita. In the book, I have a recipe for Raspberry Lavender Lemon Scones, and at the last minute, I added an Everything Bagel Scone, too (try it warm with butter and you’ll be in heaven).
That quickly led to me sharing all sorts of scones on my site, too—from these Chocolate Chip Scones to the Maple Pecan Scones, Cranberry Orange Scones, and even these Lemon Blueberry Scones. It’s fair to say that I and many of you became scone lovers. These new Apple Cinnamon Scones (and all the rest of them) are far removed from the dry, crumbly scones of coffee shops past.

These are easy scones, flaky scones, and absolutely delicious scones. How many times can I say scones in one sentence?? :P
Now that we’re heading into autumn, it was time for a Fall-inspired scone recipe. This one is perfect for breakfast with your coffee or tea, warmed up and slathered with a little butter or jam. It also makes a fabulous dessert—may I recommend a scoop of vanilla ice cream on top? Now that you’re drooling…
Let’s make Apple Cinnamon Scones!

First, let’s go over the ingredients list:
- Bob’s Red Mill Blanched Almond Flour gives the scones a delicious texture and flavor!
- Bob’s Red Mill Arrowroot Flour helps with the scones’ texture and makes them light and fluffy. With just almond flour, they can turn out a little bit dense. Tapioca flour works well as a replacement here!
- Baking Powder – for the lift!!
- Cinnamon, Sea salt, and Nutmeg—for the flavors of fall! If you’re not a nutmeg fan, skip it. Alternatively, if you like a lot of spices, add more!
- Coconut Oil – This acts like butter for our scones. We cut it into the dry ingredients while cold to help make things *flaky*
- Coconut Milk – Our cream replacement to help bring things together and make them super luscious.
- Coconut Sugar – for sweetness and for caramelising our apples (if you want)
- Maple Syrup – for more sweetness and that ~maple flavor~
- Flax egg – helps us bind things together! You can swap a regular egg if you’re not vegan.
- Honeycrisp Apple—Any apple will do, but I love Honeycrisps, so that’s what I use here. I recommend a firmer apple with a flavor you love.
- Pecans—for a little bit of crunch! I prefer them with them, but if you’re anti-nuts in your baked goods, skip them.

The process of bringing the dough together for these Apple Cinnamon Scones is pretty easy, but first, decide whether or not you want to caramelize your apples! I tested both ways, and they were both delicious. Apple caramelization just takes a few extra minutes and cooling time, and I personally think it’s worth it, but you do you. The flavor is great either way.
If you want to caramelise your apples, cut them into small pieces and cook them over low-medium heat with 2 tablespoons of coconut sugar until the sugar is dissolved and has formed a caramel-like film around the apples. You don’t want the apples to start releasing their juices. It should only take three to five minutes. Remove from heat and let it cool.

Mix together all of your dry ingredients – the Bob’s Red Mill almond and arrowroot flours, the spices, coconut sugar, salt, and baking powder. Mix, mix, mix. Then, use a pastry cutter, forks, or your fingers to work the cold coconut oil into the dry flour as you would for a pie crust. You want small bits, no big chunks, and you don’t want the coconut oil to disappear completely either. You can use a food processor for this too, if you prefer.
Then, stir your coconut milk, maple syrup, and flax egg together. Pour over your dry ingredients and stir until a dough forms. Stir in the apples (caramelised or not) and the pecans if you’re using them. Place the dough on a plastic or beeswax wrap sheet and press into a thick circle. Wrap it up, and into the fridge it goes for at least an hour to firm up.

Once chilled, cut your apple scones into wedges, brush with coconut milk (this helps with browning) and sprinkle with Turbinado sugar or coconut sugar for some ✨ sparkle ✨! Bake them, and resist eating them all warm. Do try one warm, though. You’ll be a happy camper.
These Apple Scones store great in the freezer to heat up for a quick breakfast, snack, or dessert. They are SO tasty slathered with some apple butter, ghee, or regular butter. I love enjoying them with tea or coffee. You’re going to love them! Enjoy 🍎❤️️

Gluten-Free Vegan Apple Cinnamon Scones
Ingredients
For the caramelised apples
- 1 small apple, peeled and diced (about 1 cup diced apple, about 1/4″ pieces – my favorite is Honeycrisp)
- 2 tablespoons coconut sugar
For the scones
- 2¾ cups (264g) Bob’s Red Mill blanched almond flour
- 1 cup (128g) Bob’s Red Mill arrowroot flour, or tapioca flour
- 1¼ teaspoons baking powder
- 1 teaspoon cinnamon
- ½ teaspoon sea salt
- ¼ teaspoon nutmeg
- ½ cup (100g) refined coconut oil, firm
- ¼ cup full-fat canned coconut milk, plus extra to brush on top of the scones
- 2 tablespoons pure maple syrup
- 2 tablespoons coconut sugar
- 1 flax egg, see notes for how-to make, a regular egg can also be used
- ¼ cup chopped pecans, toasted
- Raw Turbinado sugar, to sprinkle on top
Instructions
For the caramelised apples
- Combine apples and coconut sugar in a pan over low-medium heat. Saute until apples are soft and tender and the sugar has dissolved and coated the apples, about three to five minutes. Let cool completely. You should have about 1 cup.1 small apple, 2 tablespoons coconut sugar
- If you’d rather not caramelize your apples, use 1 cup diced raw apple and skip this step.
For the scones
- In a food processor or large mixing bowl, combine the blanched almond flour, arrowroot flour, baking powder, cinnamon, salt, and nutmeg. Pulse or whisk together.2¾ cups (264g) Bob’s Red Mill blanched almond flour, 1 cup (128g) Bob’s Red Mill arrowroot flour, 1¼ teaspoons baking powder, 1 teaspoon cinnamon, ½ teaspoon sea salt, ¼ teaspoon nutmeg
- Add in the coconut oil and pulse or use a pastry cutter, fork, or your hands to work the coconut oil into the dry ingredients until only small chunks of coconut oil remain.½ cup (100g) refined coconut oil
- In a small mixing bowl, whisk together the coconut milk, maple syrup, coconut sugar, and flax egg. Add to the dry ingredients and stir or pulse until completely combined. Stir in the cooled apples (or raw if you opted not to caramelise) and pecans, if using.¼ cup full-fat canned coconut milk, 2 tablespoons pure maple syrup, 2 tablespoons coconut sugar, 1 flax egg, ¼ cup chopped pecans
- Place a sheet of parchment paper on a baking sheet and dust with arrowroot flour. Put the dough on top of the parchment and press into a circle, about 1 1/2” thick and 8” across. Place in the refrigerator for at least one hour to chill.
- When ready to bake, preheat the oven to 375F. Cut the circle into 8 scones and separate from each other so they’re not touching. Use a pastry brush to brush on some coconut milk and then sprinkle with raw turbinado sugar, if using. Bake for 25 to 30 minutes or until golden brown.Raw Turbinado sugar
- Serve warm. They’re delicious with apple butter and/or butter (use vegan butter or ghee for dairy-free). Store in an airtight container in the fridge for up to a week, or in freezer-safe containers in the freezer for up to six months.
These are fantastic. I recently got the Bakerita cookbook and starting having these nutrient dense scones for breakfast every morning in place of cereal. One of the best changes I have made in my diet. Absolutely love them!!!!
That makes me so happy to hear, Robin! So glad you’re loving this recipe and the book :)
Oh, my goodness! These are so good! Another fantastic recipe from Bakerita!
So glad you love them, Ginny!
Rachel I’d like to make these with my gf sourdough discard. Any suggestions how to do that? thanks
Hi Lynette, I’d use the mix ins from this recipe and use them in my gluten-free sourdough scone recipe (minus the chocolate chips). Enjoy!
Oh my! We are new to the gluten free world and my entire family loved these. I didn’t have enough coconut oil so subbed with half butter. Will be making these again. Thank you!
So glad you enjoyed them, Krystal! Thanks so much for the kind review.
I am going to make the lavender lemon raspberry scones in your cookbook. Will the scones come out the same if I use vegan butter in place of the coconut oil?
Hi Sue, yes you can use vegan butter. Enjoy!
Hi, I was wondering if you need a food processor for this recipe? Or can I use a hand whisker.
I usually use a manual pastry blender for this :)
Amazing! The chopped pecans are sooo delicious! I have no idea if you take requests, but I thought it would be fabulous if there was a Gluten Free Sourdough Cinnamon Rolls recipe on here. I find other recipes on the internet don’t use psyllium husk, which would help a lot with the dough’s flexibility. I also like how most of your recipes give some kind of freedom to which flour is used and I love the measurements in grams. Bonus if there’s sourdough!! Anyways, thank you for sharing all of these amazing recipes!
So glad you’re loving this recipe, and thanks so much for the kind feedback and request. This is actually something I have half developed and never finished, but I’ll add it back to the top of my list because I’d love to have one up for the holidays. Thanks for the reminder – I’ll get on it!
Wow, that’s amazing! I did try making some by doing about 2/3 of the Gluten Free Sourdough Bread recipe but replacing the water with almond milk for a softer texture, as well as adding about 50g of coconut butter to the mixture. I baked the rolls at 375 degrees Fahrenheit for about 35 minutes, but I still think there is room for improvement as they did get harder after a few hours. I used the Little Spoon Farm recipe for the cinnamon filling. Also, this isn’t really related, but the ”Notify me via e-mail if anyone answers my comment” button doesn’t really work for me. Hope this was useful, and if not, that’s fine too! :)
Thanks for the feedback, Adele, that’s so odd about the email notification! I’ll check the plugin to see why it’s not working.