Preheat the oven to 325°F.
Place the finely chopped chocolate in a bowl. Microwave the coconut milk until it’s bubbling, about 30 seconds. Pour over the chopped chocolate, making sure all of it is submerged, and let stand for 1 minute. Whisk until smooth.
Spread the chocolate ganache evenly on the bottom of the frozen pie crust and return to the freezer.
In large bowl, beat the eggs until slightly foamy. Stir in the coconut sugar, maple syrup, and coconut oil. Whisk together until fully combined. Stir in the almond flour, almond milk, vanilla and salt. Add the pecans and stir until they are fully coated.
Remove the pie crust from the freezer and fill with the pecan filling.
Bake in the preheated oven at 325°F and bake for 45-50 minutes, or until the top no longer jiggles in the center. Let cool on a wire rack for one hour, and then move to the refrigerator to cool completely before slicing and serving.